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  • Tuesday, Aug 8th
    2:05 PM – 2:25 PM EDT
    (CS-21-5) Regulatory Networks Governing Nitrogen Use Efficiency in Maize and Sorghum
    Location: Meeting Room 102-103
    Symposium Speaker: Janeen Braynen, Ph.D – Cold Spring Harbor Laboratory
    Abstract Co-Author: Janeen Braynen, Ph.D – Cold Spring Harbor Laboratory
    Abstract Co-Author: Lifang Zhang, Ph.D – Cold Spring Harbor Laboratory
    Abstract Co-Author: Sunita Kumari, PhD – Cold Spring Harbor Laboratory
    Abstract Co-Author: Vivek Kumar – Cold Spring Harbor Laboratory
    Abstract Co-Author: Andrew Olson – Cold Spring Harbor Laboratory,
    Abstract Co-Author: Michael Regulski – Cold Spring Harbor Laboratory
    Abstract Co-Author: Christophe Liseron-Monfils – National Research Council Canada / Conseil national de recherches Canada
    Abstract Co-Author: Allison Gaudinier – Miller Institute University of California
    Abstract Co-Author: Mary Frank – Corteva, Agriscience
    Abstract Co-Author: Bo Shen – Corteva, Agriscience
    Abstract Co-Author: Leon Kochian – University of Saskatchewan
    Abstract Co-Author: Siohban Brady, PhD – Department of Plant Biology and Genome Center
    Abstract Co-Author: Doreen Ware – Cold Spring Harbor Laboratory,/ USDA-ARS-NAA, Ithaca
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-01) A mathematical description for the onset of systemic acquired resistance in Arabidopsis
    Location: Exhibit Hall
    Poster Presenter: Philip Berg, Ph.D – Institute for Genomics, Biocomputing & Biotechnology
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-02) Altered microRNA Expression in cax1 and cax1/cax3 Potentially Plays a Role in CAX Mediated Anoxia Tolerance.
    Location: Exhibit Hall
    Poster Presenter: Vignesh Nalliah – BCM CNRC
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-03) ATR-FTIR Spectroscopy-Linked Chemometrics: A Novel Approach to the Analysis and Control of the Invasive Species Japanese Knotweed
    Location: Exhibit Hall
    Poster Presenter: Claire A. Holden, PhD – Lancaster University
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-04) Automated Image Analysis Pipeline to Quantify Preharvest Sprouting in Quinoa (Chenopdium quinoa)
    Location: Exhibit Hall
    Poster Presenter: Stuti Shrivastava, PhD (she/her/hers) – University of Wisconsin, Madison
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-05) DIRT/3D 2.0: Upgraded image-based 3D root phenotyping platform
    Location: Exhibit Hall
    Poster Presenter: Suxing Liu, Ph.D. – University of Arizona
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-06) DIRT/3D 2.0: Upgraded image-based 3D root phenotyping platform
    Location: Exhibit Hall
    Poster Presenter: Suxing Liu, PhD (he/him/his) – The University of Arizona
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-07) Functional annotation of proteins for signaling network inference in non-model species
    Location: Exhibit Hall
    Poster Presenter: Ross Sozzani, PhD (she/her/hers) – North Carolina State University
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-08) Gramene 2023: A comparative resource on plant reference genomes, pan genomes and plant reactome pathways
    Location: Exhibit Hall
    Poster Presenter: Janeen Braynen, Ph.D – Cold Spring Harbor Laboratory
    Abstract Co-Author: Sunita Kumari, PhD – Cold Spring Harbor Laboratory
    Abstract Co-Author: Kapeel Chougule – Cold Spring Harbor Laboratory
    Abstract Co-Author: Nicholas Gladman, Ph.D – USDA-ARS
    Abstract Co-Author: Vivek Kumar – Cold Spring Harbor Laboratory
    Abstract Co-Author: Zhenyuan Lu
    Abstract Co-Author: Andrew Olson – Cold Spring Harbor Laboratory,
    Abstract Co-Author: Marcela K. Tello-Ruiz, PhD – Cold Spring Harbor Laboratory
    Abstract Co-Author: Sharon Wei – Cold Spring Harbor Laboratory
    Abstract Co-Author: Justin Elser – Oregon State University
    Abstract Co-Author: Parul Gupta – Oregon State University
    Abstract Co-Author: Sushma Naithani – Oregon State University
    Abstract Co-Author: Pankaj Jaiswal – Oregon State University
    Abstract Co-Author: Nancy George
    Abstract Co-Author: Irene Papatheodorou
    Abstract Co-Author: Doreen Ware – Cold Spring Harbor Laboratory,/ USDA-ARS-NAA, Ithaca
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-09) High Quality Geumgang1 Genome Assembly using Various Strategies with HiFi sequencing reads
    Location: Exhibit Hall
    Poster Presenter: Minyoung Song – Department of Crop Science, Konkuk University
    Abstract Co-Author: Muhyun Kim
    Abstract Co-Author: Dohye Kweon
    Abstract Co-Author: Yumi Ko
    Abstract Co-Author: Seehyun Park
    Abstract Co-Author: Ill-Min Chung
    Abstract Co-Author: Soon-Wook Kwon
    Abstract Co-Author: Tae-Ho Ham
    Abstract Co-Author: Joohyun Lee, Ph.D – Konkuk University
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-10) HypoQuantyl - A machine learning approach to quantify the growth dynamics of hypocotyls
    Location: Exhibit Hall
    Poster Presenter: Julian A. Bustamante, MS – University of Wisconsin - Madison
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-11) Identification of potential Auxin Response Candidate genes for soybean rapid canopy coverage through comparative evolution and expression analysis
    Location: Exhibit Hall
    Poster Presenter: Deisiany F. Ferreira Neres – Virginia Tech
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-12) Improving carbon allocation predictions in crop models
    Location: Exhibit Hall
    Poster Presenter: Ximin Piao, MS (she/her/hers) – University of Illinois Urbana-Champaign
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-13) kGWASflow makes k-mers based GWAS easy and helps with downstream analysis
    Location: Exhibit Hall
    Poster Presenter: Jason Wallace, PhD (he/him/his) – University of Georgia
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-14) New features supporting analysis of plant and microbial genomes in KBase
    Location: Exhibit Hall
    Poster Presenter: Kathleen Beilsmith, Ph.D. (she/her/hers) – Argonne National Laboratory
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-16) Open Science for Plants in Space: Data Sharing, Standards, and Informatics for Reuse and Knowledge Discovery
    Location: Exhibit Hall
    Poster Presenter: Kristen D. Peach, PhD, MA (she/her/hers) – NASA's GeneLab
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-17) Predicting protein-protein interactions between glycosyltransferases for plant cell wall polysaccharides synthesis
    Location: Exhibit Hall
    Poster Presenter: Mohsin Ali Nasir, PhD (he/him/his) – Ohio University
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-18) Response of Arabidopsis thaliana to xenobiotic pollutants: a QSAR analysis
    Location: Exhibit Hall
    Poster Presenter: Eva-Maria Rudler, BS Chemistry (she/her/hers) – George Mason University
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-19) Sequence and epigenetics of active and silenced nucleolus organizers in Arabidopsis
    Location: Exhibit Hall
    Poster Presenter: Dalen Fultz, PhD – Howard Hughes Medical Institute / Indiana University
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-20) SMART: An open and affordable plant phenotyping system for leaf-specific color analysis of the Arabidopsis Rosette
    Location: Exhibit Hall
    Poster Presenter: Suxing Liu, Ph.D. – University of Arizona
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-21) SMART: An open and affordable plant phenotyping system for leaf-specific color analysis of the Arabidopsis Rosette
    Location: Exhibit Hall
    Poster Presenter: Suxing Liu, PhD (he/him/his) – The University of Arizona
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-22) The AgBioData Consortium: FAIRification of agricultural data through standardization of practices and protocols across agricultural databases.
    Location: Exhibit Hall
    Poster Presenter: Sunita Kumari, PhD (she/her/hers) – Cold Spring Harbor Labs
    Abstract Co-Author: Annarita Marrano – Phoenix Bioinformatics
    Abstract Co-Author: Jaqueline Campbell
    Abstract Co-Author: Sook Jung – Washington State University
    Abstract Co-Author: Peter Harrison
    Abstract Co-Author: Dorrie Main, PhD – Washington State University
    Abstract Co-Author: John McNamara
    Abstract Co-Author: Sushma Naithani – Oregon State University
    Abstract Co-Author: Monica Poelchau
    Abstract Co-Author: Leonore Reiser – Phoenix Bioinformatics
    Abstract Co-Author: Meg Staton
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-23) Volvox_Scan: A DNA Mutation Clustering Algorithm For Population-Scale Genetics Studies
    Location: Exhibit Hall
    Poster Presenter: Charles Addo-Quaye, PhD – Metropolitan State University
    Computational Biology & Bioinformatics
  • Posters
    60 minutes
    (500-24) Regulatory Networks Governing Nitrogen Use Efficiency in Maize and Sorghum
    Location: Exhibit Hall
    Poster Presenter: Janeen Braynen, Ph.D – Cold Spring Harbor Laboratory
    Computational Biology & Bioinformatics